Details of Duplex


2D Structure dot-bracket from RNAduplex"
AACCATCGACCGTTGAGTGGAC&TCCACTGGTCGATA
....(((((((....((((((.&))))))))))))).
Details
MiRNAhsa-miR-181c-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1242,1256
Score0.923
Seed0
Au0.559
Energy-18.0
Binding len14
Me-15.775
Phylopstem4.611907714285714
Phylopflank4.45343482625
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure