Details of Duplex


2D Structure dot-bracket from RNAduplex"
CCCAGTGTTTAGACTATCTGTTC&AGCAGATCACTGGGC
(((((((........(((((((.&)))))))))))))).
Details
MiRNAhsa-miR-199b-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1425,1440
Score0.885
Seed1
Au0.588
Energy-16.6
Binding len15
Me-17.603
Phylopstem4.183559142857143
Phylopflank3.2344198924999996
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure