Details of Duplex


2D Structure dot-bracket from RNAduplex"
TAATCTCAGCTGGCAACTGTGA&CGCGGCCGCCGGCGGGAC
...((((.((((((..(((((.&)))))..)))))))))).
Details
MiRNAhsa-miR-216a-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site14,32
Score0.923
Seed0
Au0.295
Energy-21.2
Binding len18
Me-9.797
Phylopstem0.5935593833333332
Phylopflank0.22057037522727274
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure