Details of Duplex


2D Structure dot-bracket from RNAduplex"
TCACAGTGGTCTCTGGGATTAT&TCCTAGCAGACACTGATGAT
(((((((.((((((((((....&)))))).)))))))).))).
Details
MiRNAhsa-miR-216a-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site593,613
Score0.846
Seed1
Au0.647
Energy-19.9
Binding len20
Me-6.251
Phylopstem5.5744
Phylopflank5.731866521250001
Longest consecutive pairings8
Position of longest consecutive pairings5
Pairings in 3prime end4
PositionCDS
2D Structure