Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGAGTTGAGTCTGGACGTCCCG&TGGATGATGATGTTGAGACGGAAGACTTTG
((((((..((((.((((((...&.)))))).))))....)))))).
Details
MiRNAhsa-miR-219a-1-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site185,215
Score0.846
Seed0
Au0.691
Energy-18.6
Binding len23
Me-9.084
Phylopstem1.2375028333333333
Phylopflank1.8427648225
Longest consecutive pairings6
Position of longest consecutive pairings16
Pairings in 3prime end5
PositionCDS
2D Structure