Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGCTACATCTGGCTACTGGGT&GCCAAACCTCCAGATGTAGA
..((((((((((......(((&)))......)))))))))).
Details
MiRNAhsa-miR-222-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site748,768
Score1.0
Seed1
Au0.618
Energy-19.3
Binding len20
Me-8.071
Phylopstem5.562531699999999
Phylopflank3.8499560287499994
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure