Details of Duplex


2D Structure dot-bracket from RNAduplex"
CTGGGAGGTGGATGTTTACTTC&GAAGAGAAACATGCCAAACCTCCAGA
((.((((((((((((((.((((&))))..)))))).))..)))))))).
Details
MiRNAhsa-miR-30b-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site736,762
Score0.885
Seed0
Au0.618
Energy-20.0
Binding len26
Me-5.495
Phylopstem4.400597717647059
Phylopflank4.244183754999999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure