Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTTGGTCCCCTTCAACCAGCTG&CAGCTGCTGAAGGGCACCC
...(((.(((((((..((((((&)))))).))))))).))).
Details
MiRNAhsa-miR-133a-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1511,1530
Score1.0
Seed0
Au0.574
Energy-23.9
Binding len19
Me-9.027
Phylopstem3.3259852857142858
Phylopflank3.1666414275
Longest consecutive pairings7
Position of longest consecutive pairings5
Pairings in 3prime end6
PositionCDS
2D Structure