Details of Duplex


2D Structure dot-bracket from RNAduplex"
TAACACTGTCTGGTAAAGATGG&TCATCTTTATACCCTTGTGATGAATCCAGATGACACATTTGAGGTGTTAG
((((((((((((((((((((((&)))))))))................))))))...........))))))).
Details
MiRNAhsa-miR-141-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site798,848
Score0.872
Seed1
Au0.603
Energy-18.2
Binding len50
Me-3.938
Phylopstem4.273970636734694
Phylopflank5.1537078
Longest consecutive pairings9
Position of longest consecutive pairings41
Pairings in 3prime end8
PositionCDS
2D Structure