Details of Duplex


2D Structure dot-bracket from RNAduplex"
GGTGCAGTGCTGCATCTCTGGT&GCCAGACCTGAACTTTAATCAGTCTGCACA
.((((((.((((((..((((((&))))))..)).........)))))))))).
Details
MiRNAhsa-miR-143-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site2013,2043
Score1.0
Seed1
Au0.632
Energy-20.4
Binding len30
Me-7.075
Phylopstem4.12625
Phylopflank3.4286078049999995
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure