Details of Duplex


2D Structure dot-bracket from RNAduplex"
GGTGCAGTGCTGCATCTCTGGT&CAGTTAATGGCAGCTGCTGAAGGGCACCC
(((((((((((((....(((..&)))......))))).))).....))))).
Details
MiRNAhsa-miR-143-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1501,1530
Score0.923
Seed1
Au0.574
Energy-19.6
Binding len29
Me-5.763
Phylopstem3.7387867894736844
Phylopflank3.056561985
Longest consecutive pairings5
Position of longest consecutive pairings15
Pairings in 3prime end3
PositionCDS
2D Structure