Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACAGGTGAGGTTCTTGGGAGCC&CTTTGAAGTTACCTCATCTT
..(((((((((.(((.((((..&)))).)))..))))))))).
Details
MiRNAhsa-miR-125a-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site2122,2142
Score0.846
Seed1
Au0.676
Energy-18.9
Binding len20
Me-8.537
Phylopstem1.6722824444444444
Phylopflank3.6028826525
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure