Details of Duplex


2D Structure dot-bracket from RNAduplex"
GCTACTTCACAACACCAGGGCC&GGCACCTCAGATTCTTAATCCAGCATGTCGGATTGGGTGTGGTGAGTGGA
.((((.((((.(((((((((((&))).)))............................))))).)))))))).
Details
MiRNAhsa-miR-138-1-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1146,1196
Score0.923
Seed0
Au0.559
Energy-21.2
Binding len50
Me-8.519
Phylopstem2.9688515999999994
Phylopflank4.4765635575000005
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure