Details of Duplex


2D Structure dot-bracket from RNAduplex"
CCTCTGAAATTCAGTTCTTCAG&GAAGAAAGTAATCAATCAAATAAGTCTGGGTCAGAGGA
(((((((..(((((((((((..&))))))...................)))))))))))).
Details
MiRNAhsa-miR-146a-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1831,1869
Score0.846
Seed1
Au0.603
Energy-18.1
Binding len38
Me-7.308
Phylopstem5.143407886666667
Phylopflank3.60583707625
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure