Details of Duplex


2D Structure dot-bracket from RNAduplex"
TCTGGCTCCGTGTCTTCACTCCC&GAGACGCGGGGACCAA
..((((((((((((((.......&))))))))))).))).
Details
MiRNAhsa-miR-149-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site41,57
Score0.981
Seed1
Au0.353
Energy-22.2
Binding len16
Me-4.957
Phylopstem0.6164118
Phylopflank0.429018794516129
Longest consecutive pairings11
Position of longest consecutive pairings5
Pairings in 3prime end1
Position5UTR
2D Structure