Details of Duplex


2D Structure dot-bracket from RNAduplex"
CATCCCTTGCATGGTGGAGGG&CCTTCTGCCGTCAAACCAGAAGACTGGGATGA
(((((((((.(((((((((((&))))))))))))))...........)))))).
Details
MiRNAhsa-miR-188-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site979,1011
Score0.923
Seed1
Au0.544
Energy-24.1
Binding len32
Me-5.18
Phylopstem5.246896636363636
Phylopflank4.95212889375
Longest consecutive pairings14
Position of longest consecutive pairings18
Pairings in 3prime end8
PositionCDS
2D Structure