Details of Duplex


2D Structure dot-bracket from RNAduplex"
CTCCCACATGCAGGGTTTGCA&GCAGATCACTGGGCTGCAGATGGTTGGAGA
((((((..((((((((((((.&)))))))......)))))..)))...))).
Details
MiRNAhsa-miR-188-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1426,1456
Score0.923
Seed0
Au0.603
Energy-19.7
Binding len30
Me-7.795
Phylopstem3.580079722222222
Phylopflank2.8545413275000002
Longest consecutive pairings7
Position of longest consecutive pairings23
Pairings in 3prime end7
PositionCDS
2D Structure