Details of Duplex


2D Structure dot-bracket from RNAduplex"
AAAAGCTGGGTTGAGAGGGCGA&CGGATGGAGAATGGGAGGCACCTCAGATTCTTAATCCAGCA
....((((((((((((((((..&.)).))))......)))))))))).
Details
MiRNAhsa-miR-320a-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1130,1171
Score0.897
Seed0
Au0.485
Energy-21.8
Binding len25
Me-9.547
Phylopstem3.1022648739130436
Phylopflank3.979605450000001
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure