Details of Duplex


2D Structure dot-bracket from RNAduplex"
CGTCTTACCCAGCAGTGTTTGG&TCAAATAAGTCTGGGTCAGAGGA
(.(((.((((((...(((((((&)))))))...)))))).))).).
Details
MiRNAhsa-miR-200c-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1846,1869
Score1.0
Seed0
Au0.603
Energy-19.4
Binding len23
Me-9.884
Phylopstem5.086203714285714
Phylopflank4.0504888025
Longest consecutive pairings7
Position of longest consecutive pairings16
Pairings in 3prime end7
PositionCDS
2D Structure