Details of Duplex


2D Structure dot-bracket from RNAduplex"
TAATACTGCCGGGTAATGATGGA&CTAATAAGCCTGGTGTATTAA
((((((.(((((((.........&.))))))))))))).
Details
MiRNAhsa-miR-200c-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1478,1499
Score0.846
Seed0
Au0.618
Energy-16.2
Binding len15
Me-6.45
Phylopstem1.9860234571428568
Phylopflank3.7393618199999996
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure