Details of Duplex


2D Structure dot-bracket from RNAduplex"
CCAGTGGGGCTGCTGTTATCTG&AAATAATATGTAGCAGCTTCATTGC
.((((((((((((((.......&.)))))))))))))).
Details
MiRNAhsa-miR-194-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site2250,2275
Score0.846
Seed1
Au0.691
Energy-21.1
Binding len16
Me-4.026
Phylopstem4.285763514285714
Phylopflank4.574766567499999
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end1
Position3UTR
2D Structure