Details of Duplex


2D Structure dot-bracket from RNAduplex"
CCAGTGGGGCTGCTGTTATCTG&AGAGAAAGCAGCCCTGGAAAAACCAATGGACCTGGA
((((((((((((((....(((.&)))...))))))))))...............)))).
Details
MiRNAhsa-miR-194-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1695,1731
Score0.923
Seed1
Au0.574
Energy-22.7
Binding len36
Me-4.906
Phylopstem3.8139982931034484
Phylopflank3.82301122125
Longest consecutive pairings10
Position of longest consecutive pairings20
Pairings in 3prime end3
PositionCDS
2D Structure