Details of Duplex


2D Structure dot-bracket from RNAduplex"
CCAGTGGGGCTGCTGTTATCTG&CAGTTAATGGCAGCTGCTGAAGGGCACCCATGGC
(((.((((((((((((((.(((&))).))))))))))............))))))).
Details
MiRNAhsa-miR-194-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1501,1535
Score0.923
Seed0
Au0.544
Energy-22.4
Binding len34
Me-6.97
Phylopstem3.27169926923077
Phylopflank3.2828795100000003
Longest consecutive pairings10
Position of longest consecutive pairings20
Pairings in 3prime end7
PositionCDS
2D Structure