Details of Duplex


2D Structure dot-bracket from RNAduplex"
CTGGGAGAGGGTTGTTTACTCC&GAGAAAGCAGCCCTGGAAAAACCAATGGACCTGGA
(((((..((((((((((.(((.&))).))))))))))...............))))).
Details
MiRNAhsa-miR-30c-1-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1696,1731
Score0.846
Seed0
Au0.574
Energy-20.4
Binding len35
Me-7.382
Phylopstem4.640493149999999
Phylopflank3.3837465712500006
Longest consecutive pairings10
Position of longest consecutive pairings21
Pairings in 3prime end6
PositionCDS
2D Structure