Details of Duplex


2D Structure dot-bracket from RNAduplex"
CATCTTACCGGACAGTGCTGGA&TCCAGCATGTCGGATTGGGTGTGGTGAGTGG
((.(((((((((((.(((((((&)))))))))))..........))))))))).
Details
MiRNAhsa-miR-200a-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1164,1195
Score0.923
Seed0
Au0.574
Energy-22.5
Binding len31
Me-6.231
Phylopstem3.7288826666666672
Phylopflank3.7592856587499996
Longest consecutive pairings11
Position of longest consecutive pairings20
Pairings in 3prime end7
PositionCDS
2D Structure