Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACCCGTAGAACCGACCTTGCG&TGCAGAAACTTTTGATAGTGGAAGGTTGGCTGGATGGGTC
.((((((....((((((((.((&.)).))))))))....)))))).
Details
MiRNAhsa-miR-99b-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site306,346
Score0.923
Seed1
Au0.588
Energy-22.4
Binding len23
Me-11.231
Phylopstem1.5581496249999998
Phylopflank2.6817452774999992
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end7
PositionCDS
2D Structure