Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGGGCCCCCCCTCAATCCTGT&ACACGGATGGAGAATGGGAGGCACCTC
(((((((((.(((.(((((((&))).)))).)))...))).))).))).
Details
MiRNAhsa-miR-296-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1127,1154
Score0.923
Seed1
Au0.5
Energy-23.1
Binding len27
Me-6.037
Phylopstem2.864494545454545
Phylopflank3.8772091687500008
Longest consecutive pairings4
Position of longest consecutive pairings19
Pairings in 3prime end7
PositionCDS
2D Structure