Details of Duplex


2D Structure dot-bracket from RNAduplex"
GAGGGTTGGGTGGAGGCTCTCC&GGAGTATGGAGACCTCCACTGGTCGATAATCCTA
.(((((((((((((((.(((((&.)))))))))))))......))))))).
Details
MiRNAhsa-miR-296-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1228,1262
Score0.923
Seed1
Au0.544
Energy-27.4
Binding len28
Me-3.793
Phylopstem4.42794419047619
Phylopflank4.218881525
Longest consecutive pairings13
Position of longest consecutive pairings14
Pairings in 3prime end7
PositionCDS
2D Structure