Details of Duplex


2D Structure dot-bracket from RNAduplex"
GAGGGTTGGGTGGAGGCTCTCC&GGAAGCCTCCTAGAGGATGTGGTTCCTCCTATCAAACCTCC
((((..(((..(((((((.(((&)))))))))).....................)))..)))).
Details
MiRNAhsa-miR-296-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site871,912
Score0.846
Seed0
Au0.588
Energy-22.0
Binding len41
Me-14.025
Phylopstem6.118868571428571
Phylopflank4.601462515000001
Longest consecutive pairings10
Position of longest consecutive pairings31
Pairings in 3prime end7
PositionCDS
2D Structure