Details of Duplex


2D Structure dot-bracket from RNAduplex"
CAGTGCAATGATGAAAGGGCAT&ATGCCTTGTTCATAAAATCACTGG
(((((.....((((((((((((&))))))).))))).....))))).
Details
MiRNAhsa-miR-130b-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site2516,2540
Score0.846
Seed0
Au0.691
Energy-19.0
Binding len24
Me-11.995
Phylopstem4.584638438461538
Phylopflank4.6068484975
Longest consecutive pairings7
Position of longest consecutive pairings17
Pairings in 3prime end8
Position3UTR
2D Structure