Details of Duplex


2D Structure dot-bracket from RNAduplex"
TATGTAATATGGTCCACATCTT&TGGATTATATTGCAG
..((((((((((((((......&)))))))))))))).
Details
MiRNAhsa-miR-380-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site2537,2552
Score0.923
Seed1
Au0.706
Energy-16.9
Binding len15
Me-4.957
Phylopstem4.698224000000001
Phylopflank4.37715646875
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure