Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGCGAGGTTGCCCTTTGTATAT&GTGTATTAAAACAGTTAATGGCAGCTGCTGAAGGGCACCCATGGCTT
(((.(((.(((((((((((...&.))).)))))))).)).).))).
Details
MiRNAhsa-miR-381-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1490,1537
Score0.846
Seed0
Au0.529
Energy-20.6
Binding len23
Me-9.283
Phylopstem3.7398829166666663
Phylopflank3.639311594999999
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end5
PositionCDS
2D Structure