Details of Duplex


2D Structure dot-bracket from RNAduplex"
TCCGTCTCAGTTACTTTATAGC&TTGAGACGGAA
((((((((((............&)))))))))).
Details
MiRNAhsa-miR-340-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site197,208
Score1.0
Seed1
Au0.691
Energy-16.2
Binding len11
Me-13.224
Phylopstem1.05580313
Phylopflank1.8814669087499998
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure