Details of Duplex


2D Structure dot-bracket from RNAduplex"
TCTCTGGGCCTGTGTCTTAGGC&GTCTGGGTCAGAGGATGAGATGAAAGAAGCAGATGAGAGCACAGGATCTGGAGAT
(((((((((((((((((((.((&.))...))))).)))))).)))))))).
Details
MiRNAhsa-miR-330-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1854,1909
Score1.0
Seed1
Au0.529
Energy-24.6
Binding len28
Me-3.938
Phylopstem4.497501304761905
Phylopflank4.1204664837500005
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure