Details of Duplex


2D Structure dot-bracket from RNAduplex"
TCTCTGGGCCTGTGTCTTAGGC&TCTGAGCTGTCACTGCCGAAAACAGGCCGCAAGAGAG
(((((((((((((......(((&.)))....))))))).)).)))).
Details
MiRNAhsa-miR-330-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site75,112
Score0.923
Seed1
Au0.544
Energy-23.7
Binding len24
Me-5.763
Phylopstem0.398048
Phylopflank0.6196779525
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end3
Position5UTR
2D Structure