Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGGGGTGCTATCTGTGATTGA&TGAAGACACGGATGGAGAATGGGAGGCACCTCA
.(((((((((((((((.....&.)))))))...........)))))))).
Details
MiRNAhsa-miR-342-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1122,1155
Score1.0
Seed1
Au0.5
Energy-20.5
Binding len28
Me-3.793
Phylopstem2.658135253846154
Phylopflank3.7632855375000003
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure