Details of Duplex


2D Structure dot-bracket from RNAduplex"
GCCCCTGGGCCTATCCTAGAA&TCTGGAGATGGGCCGATAAAGTCAGTACGCA
((..((((((((((((((((.&))))).))))))))........)))...)).
Details
MiRNAhsa-miR-331-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1900,1931
Score0.846
Seed0
Au0.544
Energy-21.9
Binding len31
Me-8.527
Phylopstem2.909556468
Phylopflank4.1989134225
Longest consecutive pairings8
Position of longest consecutive pairings17
Pairings in 3prime end7
PositionCDS
2D Structure