Details of Duplex


2D Structure dot-bracket from RNAduplex"
TCCAGCATCAGTGATTTTGTTG&TAGCAGATCACTGGGCTGC
..((((.(((((((.(((((((&)))))))))))))))))).
Details
MiRNAhsa-miR-338-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1424,1443
Score0.846
Seed0
Au0.574
Energy-19.8
Binding len19
Me-7.236
Phylopstem3.1115905714285716
Phylopflank3.1671986425
Longest consecutive pairings18
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure