Details of Duplex


2D Structure dot-bracket from RNAduplex"
TCCCTGTCCTCCAGGAGCTCACG&GGTACCTGGTGACAGAGGAC
((((((((..(((((.(((....&))).))))).))))).))).
Details
MiRNAhsa-miR-339-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site432,452
Score0.808
Seed1
Au0.603
Energy-21.8
Binding len20
Me-6.47
Phylopstem2.223193777777778
Phylopflank3.5862335824999985
Longest consecutive pairings5
Position of longest consecutive pairings11
Pairings in 3prime end3
PositionCDS
2D Structure