Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGAGCGCCTCGACGACAGAGCCG&TGGTATTGATTGTGGAGGTGCA
...(((((((.(((((((.((((&)))).))).)))).))))))).
Details
MiRNAhsa-miR-339-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site561,583
Score0.923
Seed0
Au0.632
Energy-24.7
Binding len22
Me-9.339
Phylopstem6.029998750000001
Phylopflank5.242413624999999
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure