Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTTTTCATTATTGCTCCTGACC&GGTCAGAGGATGAGATGAAAGAA
(((((((((....((.((((((&)))))).))....))))))))).
Details
MiRNAhsa-miR-335-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1859,1882
Score0.846
Seed1
Au0.544
Energy-17.6
Binding len23
Me-12.874
Phylopstem4.17538008888889
Phylopflank4.34497906625
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure