Details of Duplex


2D Structure dot-bracket from RNAduplex"
GCCCTGAACGAGGGGTCTGGAG&CCAGACCTGAACTTTAATCAGTCTGCA
((.((((..(((((((((((..&))))))))...)))...))))...)).
Details
MiRNAhsa-miR-345-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site2014,2041
Score1.0
Seed0
Au0.632
Energy-19.6
Binding len27
Me-8.865
Phylopstem3.5647239999999996
Phylopflank3.2347874674999995
Longest consecutive pairings8
Position of longest consecutive pairings19
Pairings in 3prime end6
Position3UTR
2D Structure