Details of Duplex


2D Structure dot-bracket from RNAduplex"
TAGGTAGTTTCCTGTTGTTGGG&TGTGACAGCAGGAGTGCCA
..((((..((((((((((((.(&).)))))))))))))))).
Details
MiRNAhsa-miR-196b-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1551,1570
Score0.846
Seed0
Au0.603
Energy-19.5
Binding len19
Me-8.814
Phylopstem2.6976907833333335
Phylopflank4.022952642500001
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure