Details of Duplex


2D Structure dot-bracket from RNAduplex"
TAGGTAGTTTCCTGTTGTTGGG&AACAAAGGAAGCCTCCTAG
((((..(((((((.(((((...&))))))))))))..)))).
Details
MiRNAhsa-miR-196b-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site865,884
Score0.923
Seed0
Au0.559
Energy-18.3
Binding len19
Me-10.814
Phylopstem6.433127142857144
Phylopflank4.68675196875
Longest consecutive pairings12
Position of longest consecutive pairings7
Pairings in 3prime end5
PositionCDS
2D Structure