Details of Duplex


2D Structure dot-bracket from RNAduplex"
CAAAGTGCTCATAGTGCAGGTAG&GTACTAGAGCAA
.....(((((.((((((......&))))))))))).
Details
MiRNAhsa-miR-20b-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1672,1684
Score0.846
Seed0
Au0.588
Energy-15.3
Binding len12
Me-16.49
Phylopstem2.6192911666666667
Phylopflank3.6721898287500006
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure