Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACTGTAGTATGGGCACTTCCAG&TGGAGGTGCATACATTAAACTCCTAGCAGA
.((((((((((.(((((((((.&)))))))))...)))...)))....)))).
Details
MiRNAhsa-miR-20b-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site573,603
Score0.846
Seed1
Au0.647
Energy-18.6
Binding len30
Me-7.14
Phylopstem5.54511
Phylopflank5.743522586250002
Longest consecutive pairings9
Position of longest consecutive pairings21
Pairings in 3prime end7
PositionCDS
2D Structure