Details of Duplex


2D Structure dot-bracket from RNAduplex"
TCAGGCTCAGTCCCCTCCCGAT&TGGGAGGCACCTCAGATTCTTAATCCAGCATGTCGGATTGGGTGTGGT
(((.((((((((((((((((..&)))))))...........................))))))))).))).
Details
MiRNAhsa-miR-484
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1141,1189
Score0.827
Seed0
Au0.515
Energy-26.3
Binding len48
Me-6.97
Phylopstem2.7912199534883713
Phylopflank4.42583767
Longest consecutive pairings9
Position of longest consecutive pairings5
Pairings in 3prime end6
PositionCDS
2D Structure