Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGAGGCTGGCCGTGATGAATTC&CGCGGCCGCCG
...(((.(((((((........&)))))))))).
Details
MiRNAhsa-miR-485-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site14,25
Score1.0
Seed0
Au0.278
Energy-20.0
Binding len11
Me-9.027
Phylopstem0.41400751428571425
Phylopflank0.16889375500000003
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end0
Position5UTR
2D Structure