Details of Duplex


2D Structure dot-bracket from RNAduplex"
GTGGTTATCCCTGCTGTGTTCG&GAGCACAGGATCTGGAGATGGGCCGA
.(((((((((((.((((((((.&)))))))).)...)).))))).))).
Details
MiRNAhsa-miR-487a-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1890,1916
Score0.923
Seed1
Au0.529
Energy-20.8
Binding len26
Me-5.082
Phylopstem2.0808999375
Phylopflank4.522619150000001
Longest consecutive pairings8
Position of longest consecutive pairings18
Pairings in 3prime end7
PositionCDS
2D Structure