Details of Duplex


2D Structure dot-bracket from RNAduplex"
AATCATACAGGGACATCCAGTT&AACTGGTAGTTCTATAATAAAAATGAGCATATGTTCTGTTGTGAAGAGCTAAATGCAATAAAGTTTCTGTATGGTTG
((((((((((((((........&.)))))))))))))).
Details
MiRNAhsa-miR-487a-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site2328,2405
Score0.923
Seed1
Au0.691
Energy-17.8
Binding len16
Me-4.906
Phylopstem5.084561285714286
Phylopflank4.4726736725
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure